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Amber Molecular Dynamics
BIOMOLECULAR SIMULATION TOOL
AMBER is a key application in Molecular Dynamics used to simulate biocatalysis and the interaction between drug candidates and protein receptors. At the begining, it was a program designed to do Assisted Model Building with Energy Refinement and now is a suite which provides a set of biomolecular simulation tools to apply the AMBER force fields. Released in april 2022, AMBER 22 and AmberTools 22 are still the best software packages for Molecular Dynamics.
An exemplary feature of AMBER is the ability to use NVIDIA GPUs to massively accelerate complex molecular simulations. This enhances sampling efficiency, improves research accuracy, enables more advanced science and speeds up the research process.
License fees for Amber22 will change on April 15, 2023. The fee for not-for-profit users will be removed, and fees for for-profit users will become $25,000 USD for new licensees, and $20,000 for returning sites.
AMBER CERTIFIED MD SYSTEMS
As the sole provider of AMBER Certified MD Systems in Europe, LinuxVixion offer turnkey solutions in collaboration with key AMBER developer Professor Ross Walker to offer value-add systems for GPU accelerated Molecular Dynamics simulations.
The Amber22 package builds on AmberTools22 by adding the pmemd program, which resembles the sander (molecular dynamics) code in AmberTools, but provides (much) better performance on multiple CPUs, and dramatic speed improvements on GPUs.
- Designed to meet the requirements for atomistic Molecular Dynamics simulations.
- Guaranteed to be optimized to meet or exceed the published performance numbers.
- Preinstalled AMBER GPU computing solutions, designed in collaboration and genuinely certified by AMBER Developers.
- Includes example job submission scripts, benchmarks, fully validated test suite and latest software patches for quick implementation.
- Fully customizable to meet your budget.
Save time installing, optimizing, benchmarking and validating and do more science instead.
Image: A pseudotrajectory of the homodecameric human glutamine synthetase.
Benedikt Frieg and Holger Gohlke (FZJ Jülich)
If you want the fastest AMBER Molecular Dynamics solution on desktop hardware, take a look at our specialized GPU supercomputers
CERTIFIED SYSTEMS
Our GPU Workstations and Servers are certified. All NVidia GeForce systems are fully validated for numerical correctness using custom validation suites.
«I personally verify all LinuxVixion machines»